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Benefits and Pitfalls

MP2RAGE

NeuroPoly Lab, Polytechnique Montreal, Quebec, Canada

This widespread availability and its turnkey acquisition/fitting procedures are a main contributing factor to the growing interest for including quantitative T1 maps in clinical and neuroscience studies. T1 values measured using MP2RAGE showed high levels of reproducibility for the brain in an inter- and intra-site study at eight sites (same MRI hardware/software and at 7 T) of two subjects Voelker et al., 2016. Not only does MP2RAGE have one of the fastest acquisition and post-processing times among quantitative T1 mapping techniques, but it can accomplish this while acquiring very high resolution T1 maps (1 mm isotropic at 3T and submillimeter at 7T, both in under 10 min Fujimoto et al., 2014), opening the doors to cortical studies which greatly benefit from the smaller voxel size Waehnert et al., 2014Beck et al., 2018Haast et al., 2018.

Despite these benefits, MP2RAGE and similar dictionary-based techniques have certain limitations that are important to consider before deciding to incorporate them in a study. Good reproducibility of the quantitative T1 map is dependent on using one pre-calculated dictionary. If two different dictionaries are used (e.g. cross-site with different MRI vendors), the differences in the dictionary interpolations will likely result in minor differences in T1 estimates for the same data. Also, although the B1-sensitivity of the MP2RAGE T1 maps can be reduced with proper protocol optimization, it can be substantial enough that further correction using a measured B1 map should be done Marques & Gruetter, 2013Haast et al., 2018. However B1 mapping brings an additional potential source of error, so carefully selecting a B1 mapping technique and accompanying post-processing method (e.g. filtering) should be done before integrating it in a T1 mapping protocol Boudreau et al., 2017. Lastly, the MP2RAGE equations (and thus, dictionaries) assume monoexponential longitudinal relaxation, and this has been shown to result in suboptimal estimates of the long T1 component for a biexponential relaxation model Rioux et al., 2016, an effect that becomes more important at higher fields.

References
  1. Voelker, M. N., Kraff, O., Brenner, D., Wollrab, A., Weinberger, O., Berger, M. C., Robinson, S., Bogner, W., Wiggins, C., Trampel, R., Stöcker, T., Niendorf, T., Quick, H. H., Norris, D. G., Ladd, M. E., & Speck, O. (2016). The traveling heads: multicenter brain imaging at 7 Tesla. MAGMA, 29(3), 399–415.
  2. Fujimoto, K., Polimeni, J. R., van der Kouwe, A. J. W., Reuter, M., Kober, T., Benner, T., Fischl, B., & Wald, L. L. (2014). Quantitative comparison of cortical surface reconstructions from MP2RAGE and multi-echo MPRAGE data at 3 and 7 T. Neuroimage, 90, 60–73.
  3. Waehnert, M. D., Dinse, J., Weiss, M., Streicher, M. N., Waehnert, P., Geyer, S., Turner, R., & Bazin, P.-L. (2014). Anatomically motivated modeling of cortical laminae. Neuroimage, 93 Pt 2, 210–220.
  4. Beck, E. S., Sati, P., Sethi, V., Kober, T., Dewey, B., Bhargava, P., Nair, G., Cortese, I. C., & Reich, D. S. (2018). Improved Visualization of Cortical Lesions in Multiple Sclerosis Using 7T MP2RAGE. Am. J. Neuroradiol.
  5. Haast, R. A. M., Ivanov, D., & Uludağ, K. (2018). The impact of B1+ correction on MP2RAGE cortical T1 and apparent cortical thickness at 7T. Hum. Brain Mapp., 39(6), 2412–2425.